Remove APIs deprecated since 0.12 from reef-wake

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lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/MessagingTransportFactory.java-46-   * @deprecated Have an instance injected instead.
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/MessagingTransportFactory.java:48:  @Deprecated
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/MessagingTransportFactory.java-49-  @Inject
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/MessagingTransportFactory.java-50-  public MessagingTransportFactory(final LocalAddressProvider localAddressProvider) {
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lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/MessagingTransportFactory.java-55-   * @deprecated Have an instance injected instead.
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/MessagingTransportFactory.java:57:  @Deprecated
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/MessagingTransportFactory.java-58-  public MessagingTransportFactory() {
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/MessagingTransportFactory.java-59-    this.localAddress = LocalAddressProviderFactory.getInstance().getLocalAddress();
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lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java-112-   * @deprecated in 0.12 use the constructor that takes a LocalAddressProvider instead.
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java-113-   */
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java:114:  @Deprecated
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java-115-  public NettyMessagingTransport(
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java-116-      final String hostAddress,
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lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java-237-   * @deprecated in 0.11 use the constructor that takes a TcpProvider and LocalAddressProvider instead.
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java-238-   */
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java:239:  @Deprecated
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java-240-  public NettyMessagingTransport(final String hostAddress, final int port,
lang/java/reef-wake/wake/src/main/java/org/apache/reef/wake/remote/transport/netty/NettyMessagingTransport.java-241-                                 final EStage<TransportEvent> clientStage,